SiROP opportunities [ROCS]

3D Surface Reconstruction from Sparse Viewpoints for Medical Education and Surgical Navigation
In medical education and surgical navigation, achieving accurate multi-view 3D surface reconstruction from sparse viewpoints is a critical challenge. This Master's thesis addresses this problem by first computing normal and optionally reflectance maps for each viewpoint, and then fusing this data to obtain the geometry of the scene and, optionally, its reflectance. The research explores multiple techniques for normal map computation, including photometric stereo, data-driven methods, and stereo matching, either individually or in combination. The outcomes of this study aim to pave the way for the creation of highly realistic and accurate 3D models of surgical fields and anatomical structures. These models have the potential to significantly improve medical education by providing detailed and interactive representations for learning. Additionally, in the context of surgical navigation, these advancements can enhance the accuracy and effectiveness of surgical procedures. References: Yu, Zehao, Peng, Songyou, Niemeyer, Michael, Sattler, Torsten, Geiger, Andreas. MonoSDF: Exploring Monocular Geometric Cues for Neural Implicit Surface Reconstruction. NeurIPS 2022. Baptiste Brument and Robin Bruneau and Yvain Quéau and Jean Mélou and François Lauze and Jean-Denis Durou and Lilian Calvet. RNb-Neus: Reflectance and normal Based reconstruction with NeuS. CVPR 2024. Gwangbin Bae and Andrew J. Davison. Rethinking Inductive Biases for Surface Normal Estimation. CVPR 2024.
Enhancing 3D Reconstruction and Tracking of Anatomy for Open Orthopedic Surgery
Computer-assisted interventions have advanced significantly with computer vision, improving tasks like surgical navigation and robotics. While marker-based navigation systems have increased accuracy and reduced revision rates, their technical limitations hinder integration into surgical workflows. This master thesis proposes using the OR-X research infrastructure to collect datasets of human anatomies with 3D ground truth under realistic surgical conditions. The project will evaluate state-of-the-art 3D reconstruction and tracking methods and adapt them to the orthopedic image domain, focusing on a promising marker-less optical camera-based approach for spine surgery. This work aims to enhance precision and integration in surgical navigation systems.
Advancing Camera Localization in Surgical Environments
OR-X (https://or-x.ch) is an innovative research infrastructure replicating an operating theater, equipped with an extensive array of cameras. This setup enables the collection of comprehensive datasets through densely positioned cameras, capturing detailed surgical scenes. A key challenge addressed in this master thesis is the computation of camera positions and orientations for dynamic egocentric views, such as those from head-mounted displays or GoPro cameras. Solving this issue can significantly impact applications in automatic documentation, education, surgical navigation, and robotic surgery.
Development of a surgical drill endeffector for a 7-DoF surgical arm
In the field of spinal surgery, particularly in tasks related to bone drilling and screw placement, precision and accuracy are key for ensuring patient safety and optimal outcomes. The inherent complexities and risk nature of spinal procedures highlights the need for enhanced precision that can enhance the skills of surgeons and support them in the decision process during critical procedures. Robotic surgery has the potential to offer a reliable and precise system for orthopedic surgeries, capable of providing time feedback of the task in hand that can be used by the surgeons for the intraoperative decision-making process of the surgery. This master thesis aims to contribute to the advancement of robotic surgery by focusing on the development and integration of a robotic drill end-effector designed for spinal procedures. The master thesis is a collaboration between the OR-X of the University Hospital Balgrist, and the BIROMED-Lab of the University of Basel.